Analysis of polymorphisms associated with footrot in domestic and wild representatives of the genus ovis
https://doi.org/10.26897/2074-0840-2024-3-46-50
Abstract
The article presents the results of genotype determination in three target SNPs in the MPDZ gene, a potential candidate influencing the resistance of sheep to footrot, in representatives of domestic and wild Ovis. High-density SNP profiles generated for 15 local sheep breeds and 4 wild species of the genus Ovis were used as materials for the study. SNP profiles of 10 foreign breeds were added to the sample as comparison groups. Major and minor alleles in target SNPs (rs418747104, rs426927857, rs406749947) were determined. The influence of specific genotypes in target SNPs on resistance to footrot is discussed. In this study, we made the first attempt to understand the genetic mechanisms underlying resistance/susceptibility to footrot in domestic sheep breeds raised in Russia and wild representatives of the genus Ovis.
About the Authors
T. E. DeniskovaRussian Federation
Tatyana E. Deniskova, Ph D. Biol. sciences, Associate Professor, Leading Researcher of the Group of Genetics and Genomics of small cattle
tel.: (916) 914-20-17
60 Dubrovitsy village, Podolsk, Moscow region, 142132
A. V. Dotsev
Russian Federation
Arsen V. Dotsev, Ph D. Biol. sciences, Leading Researcher, Head of the Laboratory of Population and Evolutionary Genomics of Animals
tel.: (915) 316-79-65
60 Dubrovitsy village, Podolsk, Moscow region, 142132
References
1. Mucha S., Bunger L., Conington J. Genome-wideassociation study of footrot in Texel sheep • Genetics, se-lection, evolution: GSE, 2015. No. 47 (1). P. 35. DOI:10.1186/s12711-015-0119-3.
2. Zingg D. [et al.] Epidemiological and economic evalu-ation of alternative on-farm management scenarios for ovinefootrot in Switzerland • Frontiers in Veterinary Science,2017. No. 4. P. 70. DOI: 10.3389/fvets.2017.00070.
3. Raadsma H.W., Dhungyel O.P. A review of foot-rot in sheep: new approaches for control of virulent foot-rot • Livestock Science, 2013. No. 156. Pp. 115-125. DOI:10.1016/j.livsci.2013.06.011.
4. Niggeler A. [et al.] A genome-wide significant asso-ciation on chromosome 2 for footrot resistance/susceptibil-ity in Swiss White Alpine sheep • Animal genetics, 2017.No. 48 (6). Pp. 712-715. DOI:10.1111/age.12614
5. Gaspar D. [et al.] Genome-wide association studyidentifies genetic variants underlying footrot in PortugueseMerino sheep • BMC genomics, 2024. No. 25 (1). P. 100.DOI: 10.1186/12864-023-09844-x.
6. Cinar M.U. [et al.] Genome-wide association withfootrot in hair and wool sheep • Frontiers in genetics, 2024.No. 14. P. 1297444. DOI:10.3389/fgene.2023.129744449
7. Igoshin A.V. [et al.] Copy number variants in genomesof local sheep breeds from Russia • Animal Genetics, 2022.No. 53 (1). Pp. 119-132. DOI: 10.1111/age.13163.
8. Dotsev A. [et al.] Genome-Wide Insights into In-traspecific Taxonomy and Genetic Diversity of Argali(Ovis ammon) • Diversity, 2023. No. 15 (5). P. 627. DOI:10.3390/d15050627.
9. Deniskova T.E. [et al.] Analysis of polymorphismin the major genes for reproductive traits in sheep (Ovis spp.)• Agricultural Biology, 2023. No. 58 (6). P. 1046-1056. DOI:10.15389/agrobiology.2023.6.1046eng.
10. Wimmershoff J.[etal.] Outbreak of severefoot rot associated with benign Dichelobacter nodosusin an Alpine ibex colony in the Swiss Prealps • SchweizArch Tierheilkd, 2015. No. 157 (5). P. 277-284. DOI:https://doi.org/10.17236/sat00021
11. Zinovkin I.A., Voronkova O.A. Comparison of the degreeof resistance of pure line sheep breeds and their hybrids to footrot and its treatment. Young researchers of agro-industrialand forestry complexes - to the regions. Vol. 3. Part 2. Biolog-ical sciences: Collection of scientific papers based on the re-sults of the VIII All-Russian Scientific and Practical Confer-ence with international participation • Vologda-Molochnoye:Federal State Budgetary Educational Institution of HigherEducation Vologda GMHA, 2023. 250 p.
12. Emery D.L., Stewart D.J., Clark B.L. The compara-tive susceptibility of five breeds of sheep to foot-rot • Aus-tralian Veterinary Journal, 1984. No. 61 (3). P. 85-88. DOI:10.1111/j.1751-0813.1984.tb15524.x.
Review
For citations:
Deniskova T.E., Dotsev A.V. Analysis of polymorphisms associated with footrot in domestic and wild representatives of the genus ovis. Sheep, goats, wool business. 2024;(3):46-50. (In Russ.) https://doi.org/10.26897/2074-0840-2024-3-46-50